CDS

Accession Number TCMCG006C60838
gbkey CDS
Protein Id XP_013718200.1
Location complement(join(51023011..51023188,51023277..51023467,51023577..51024481,51024576..51024747,51024823..51024898,51024994..51025113,51025208..51025372,51025450..51025540,51025610..51025694,51025792..51025947,51026043..51026099,51026193..51026288,51026514..51026629,51026723..51026861))
Gene LOC106421920
GeneID 106421920
Organism Brassica napus

Protein

Length 848aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013862746.2
Definition auxin response factor 2-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K14486        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007568        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008285        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009838        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009900        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009911        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010047        [VIEW IN EMBL-EBI]
GO:0010150        [VIEW IN EMBL-EBI]
GO:0010227        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010959        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034762        [VIEW IN EMBL-EBI]
GO:0034764        [VIEW IN EMBL-EBI]
GO:0034765        [VIEW IN EMBL-EBI]
GO:0034767        [VIEW IN EMBL-EBI]
GO:0035670        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043266        [VIEW IN EMBL-EBI]
GO:0043268        [VIEW IN EMBL-EBI]
GO:0043269        [VIEW IN EMBL-EBI]
GO:0043270        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048440        [VIEW IN EMBL-EBI]
GO:0048467        [VIEW IN EMBL-EBI]
GO:0048481        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048582        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0090693        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901379        [VIEW IN EMBL-EBI]
GO:1901381        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903286        [VIEW IN EMBL-EBI]
GO:1903288        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1904062        [VIEW IN EMBL-EBI]
GO:1904064        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000243        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAGTTCGGAAGTTTCTATGAAAGGAAATCGTGGACGAGGAGAAAACTTCTCCTCCGCTGGTTACAGTGACCCGACGGTCGCCGGCGAGGCGCAGAAAACTCAGTCTAACCGATCTGTGGCTGCAGAGCGCGTTGTCGACCCGGAAGCTGCTCTCTACCGTGAGCTGTGGCACGCTTGTGCTGGTCCTCTCGTGACAGTCCCTCGACAAGATGACCGAGTCTTCTACTTCCCTCAGGGGCACATCGAGCAGGTGGAAGCATCGACAAATCAAGCTGCAGAACAGCAGATGCCTCTCTATGATCTTCCTTCGAAGATCCTTTGTCGTGTCATTAATGTTGATTTAAAGGCAGAGGCAGACACCGACGAAGTTTATGCGCAGATTACTCTTCTTCCGGAGCCTGTTCAAGACGAGAATGCAATTGAGAAAGAGTCGCCTCCTCCTCCGCCCCCAAGGTTCCAAGTGCACTCCTTCTGCAAAACCTTGACTGCATCGGACACAAGTACACATGGTGGATTTTCTGTGCTTAGGCGGCATGCGGATGAATGTCTCCCACCTCTGGATATGTCACGTCAACCTCCTACTCAGGAGTTAGTTGCAAAAGATCTGCATGCAAGCGAGTGGCGTTTCCGACATATTTTCCGAGGTCAACCACGAAGGCATTTGCTTCAGAGTGGATGGAGCGTGTTTGTTAGCTCCAAGAGGCTGGTCGCAGGCGATGCTTTTATATTTCTAAGGGGCGAGAATGGAGAATTACGTGTGGGTGTAAGGCGTGCAATGCGGCAGCAAGGAAATGTGCCATCCTCTGTTATATCAAGCCACAGCATGCATCTCGGAGTATTGGCCACTGCCTGGCACGCTATTTCAACTGGAACCATGTTTACAGTCTACTATAAACCGAGGACTAGTCCTTCAGAGTTTATTGTTCCGTTTGATCAGTATACGGAGTCCGTGAAGAATAACTACTCCATAGGCATGAGATTTAAAATGAGATTTGAAGGCGAAGAGGCTCCCGAGCAGAGGTTTACTGGCACAATCGTTGGGATTGAAGACTCTGACCCCACGAGGTGGGCAAAATCAAAATGGAGATCCCTCAAGGTACGGTGGGATGAGACCACTAGTATTCCTCGCCCTGATAGAGTATCCCCGTGGAAGATAGAGCCAGCTCTTTCTCCTCCTGCTTTGAGCCCTGTACCAATGCCTAGGCCTAAGAGGCCCAGATCTAATCTAGCTTCTTCAACTCCGGACTCTTCCATGCGCATAAGGGAAGGCTCATCTAAGGCAAACATGGACCCTTTACCGGCAAGTGGACTATCAAGGGTCTTGCAAGGTCAAGAATACCCGACCTTGAGAACGAAACATGTTGAGAGTGTAGAATGCGATGCTCCTGAAAATTCGGTTGTGTGGCAATCGTCAACTGATGATGACAAGGTTGATGTGATTTCAGCTTCTAGGAGATATGAGAACTGGATATCCTCAGGTAGGCATGGACCTACTTGCACGGATTTGCTTTCTGGCTTTGGGACAAACATAGAACCACCTCACGGTCATCAGATACCTTTTTATGACCGTTTATCATCACCACCTTCTGTGGCTGCAAGGAAAATCCTCAGCGACCAGGATGGCAAGTTTGAATATCTTGCTAACCAGTGGATGATGCACTCAGGCCTTTCCCTGAAGTTACATGAATCTCCTAAAGTCCCTGCCGCATCTGATGCCTCTTTCCAAGGGATAGGCAATCCCAATTACGGCGAATATGCTTTGCCTCGTGCAGTGACGACTGAGAATGCTGCTGGCAACTGGCCAATACGTCCACGTGCTCTAAATTATTTTGAAGAAGCGGTTCATGCTCAGGCTAGAGAGCATGTGACAAAACGTCCTGCGGTCGTACAAGAGGAGGCAGCAAAGCCAAGAGACGGGAACTGCAGGCTTTTTGGCATTCCTCTGGTGAACAACGTGAATGGGACAGATACAACTTTGTCTCAGAGAAACAATTTGAATGACCCTGCGGGGCCTACGCAGATGGCATCACCAAAGGTTCAGGATCTTTCTGACCAGTCCAAAGGGTCAAAATCGACAAATGATCATCGTGAGCAAGGACGACCATTCCCGGTTAGTAAACCCCATCCGAAAGACGTTCAAACCAAAACAAACTCATGTAGGAGCTGCACGAAGGTTCAGAAGCAGGGGATTGCACTTGGCCGGTCAGTGGATCTCTCAAAGTTCCAGAACTATGAGGAGTTGGTTACTGAATTGGATAGGCTGTTTGAGTTCAATGGAGAGTTGATGGCTCCTAAGAAAGATTGGCTGATAGTTTACACAGATGATGAGAATGATATGATGCTTGTTGGAGACGATCCTTGGCAGGAGTTTTGTTGCATGGTTCGTAAAATCTTCATATACACGAAAGAGGAGGTCAGGAAGATGAACCCGGGAACTCTATGCTGTAGGAACGAGGAAGAACCAGTTGTTGGGGAAGGATCAGATGCAAAGGACGCGAAGTCTGCATCGAATCCTTCATTGTCCAGCGCCGGAAACTCTTAA
Protein:  
MASSEVSMKGNRGRGENFSSAGYSDPTVAGEAQKTQSNRSVAAERVVDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVINVDLKAEADTDEVYAQITLLPEPVQDENAIEKESPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYTESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPALSPVPMPRPKRPRSNLASSTPDSSMRIREGSSKANMDPLPASGLSRVLQGQEYPTLRTKHVESVECDAPENSVVWQSSTDDDKVDVISASRRYENWISSGRHGPTCTDLLSGFGTNIEPPHGHQIPFYDRLSSPPSVAARKILSDQDGKFEYLANQWMMHSGLSLKLHESPKVPAASDASFQGIGNPNYGEYALPRAVTTENAAGNWPIRPRALNYFEEAVHAQAREHVTKRPAVVQEEAAKPRDGNCRLFGIPLVNNVNGTDTTLSQRNNLNDPAGPTQMASPKVQDLSDQSKGSKSTNDHREQGRPFPVSKPHPKDVQTKTNSCRSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTLCCRNEEEPVVGEGSDAKDAKSASNPSLSSAGNS